initial merge of IMS code, 4 maven projects. Does not deploy properly at the moment, but compiles

git-svn-id: https://subversion.umiacs.umd.edu/ace/trunk@165 f1b3a171-7291-4a19-a512-95ad0ad9394a

ace-am/pom.xml

@@ -14,7 +14,7 @@
     <url>http://maven.apache.org</url>
     <properties>
         <project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
-        <netbeans.hint.deploy.server>Tomcat60</netbeans.hint.deploy.server>
+        <netbeans.hint.deploy.server>Tomcat</netbeans.hint.deploy.server>
     </properties>
 
     <build>

ace-am/src/main/webapp/META-INF/context.xml

 <?xml version="1.0" encoding="UTF-8"?>
-<Context path="/ace-am">
+<Context path="/ace-am-1.7-SNAPSHOT">
   <Logger className="org.apache.catalina.logger.FileLogger" prefix="aceam." suffix=".log" timestamp="true"/>
   <!-- Configuration for authentication. This information should not need to be
   changed at all unless you have your own authentication provider-->

ace-cli/examples/issue-example.py

@@ -2,7 +2,7 @@ import hashlib
 import binascii
 from suds.client import Client
 
-filename='test2.py'
+filename='issue-example.py'
 
 digFile = open(filename,'rb')
 hashAlg = hashlib.sha256()

ace-ims-ear/pom.xml

+<?xml version="1.0"?>
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
+    <modelVersion>4.0.0</modelVersion>
+    <parent>
+        <artifactId>ace</artifactId>
+        <groupId>edu.umiacs.ace</groupId>
+        <version>1.7-SNAPSHOT</version>
+    </parent>
+    <packaging>ear</packaging>
+    <groupId>edu.umiacs.ace</groupId>
+    <artifactId>ace-ims-ear</artifactId>
+    <name>ace-ims-ear</name>
+    <url>http://maven.apache.org</url>
+    <properties>
+        <project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
+        <netbeans.hint.deploy.server>gfv3ee6</netbeans.hint.deploy.server>
+    </properties>
+    <dependencies>
+        <dependency>
+            <groupId>edu.umiacs.ace</groupId>
+            <artifactId>ace-ims-ejb</artifactId>
+            <version>${project.version}</version>
+            <type>ejb</type>
+        </dependency>
+        <dependency>
+            <groupId>edu.umiacs.ace</groupId>
+            <artifactId>ace-ims-war</artifactId>
+            <type>war</type>
+            <version>${project.version}</version>
+        </dependency>
+    </dependencies>
+    <build>
+        <finalName>ace-ims</finalName>
+        <plugins>
+            <plugin>
+                <artifactId>maven-ear-plugin</artifactId>
+                <configuration>
+                    <modules>
+                        <jarModule>
+                            <groupId>edu.umiacs.ace</groupId>
+                            <artifactId>ace-ims-server</artifactId>
+                            <includeInApplicationXml>true</includeInApplicationXml>
+                        </jarModule>
+                        <jarModule>
+                            <groupId>edu.umiacs.ace</groupId>
+                            <artifactId>ace-common</artifactId>
+                            <includeInApplicationXml>true</includeInApplicationXml>
+                        </jarModule>
+                        <!-- <ejbModule>
+                            <groupId>edu.umiacs.ace</groupId>
+                            <artifactId>ace-ims-ejb</artifactId>
+                        </ejbModule>
+                        <webModule>
+                            <groupId>edu.umiacs.ace</groupId>
+                            <artifactId>ace-ims-war</artifactId>
+                        </webModule>-->
+                    </modules>
+                    <jboss>
+                        <version>4</version>
+                        <loader-repository>edu.umiacs.ace:archive=ace-ims.ear</loader-repository>
+                    </jboss>					
+                </configuration>
+            </plugin>
+            <plugin>
+                <groupId>org.codehaus.cargo</groupId>
+                <artifactId>cargo-maven2-plugin</artifactId>
+                <version>0.3-SNAPSHOT</version>
+                <configuration>
+                    <container>
+                        <containerId>jboss4x</containerId>
+                        <type>remote</type>
+                    </container>
+                </configuration>
+            </plugin>
+        </plugins>
+    </build>
+
+</project>
+

ace-ims-ear/src/main/application/META-INF/glassfish-application.xml

+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE glassfish-application PUBLIC "-//GlassFish.org//DTD GlassFish Application Server 3.1 Java EE Application 6.0//EN" "http://glassfish.org/dtds/glassfish-application_6_0-1.dtd">
+<glassfish-application/>

ace-ims-ejb/pom.xml

+<?xml version="1.0"?>
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
+    <modelVersion>4.0.0</modelVersion>
+    <parent>
+        <artifactId>ace</artifactId>
+        <groupId>edu.umiacs.ace</groupId>
+        <version>1.7-SNAPSHOT</version>
+    </parent>
+    <groupId>edu.umiacs.ace</groupId>
+    <artifactId>ace-ims-ejb</artifactId>
+    <name>ace-ims-ejb</name>
+    <packaging>ejb</packaging>
+    <url>http://maven.apache.org</url>
+    <properties>
+        <project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
+    </properties>
+    <repositories>
+        <repository>
+            <id>maven2-repository.dev.java.net</id>
+            <name>Java.net Repository for Maven</name>
+            <url>http://download.java.net/maven/2/</url>
+            <layout>default</layout>
+        </repository> 
+    </repositories>
+    <dependencies>
+        <dependency>
+            <groupId>javax</groupId>
+            <artifactId>javaee-web-api</artifactId>
+            <version>6.0</version>
+            <scope>provided</scope>
+        </dependency>
+        <dependency>
+            <groupId>javax.persistence</groupId>
+            <artifactId>persistence-api</artifactId>
+            <version>1.0</version>
+            <scope>provided</scope>
+        </dependency>
+        <dependency>
+            <groupId>edu.umiacs.ace</groupId>
+            <artifactId>ace-ims-server</artifactId>
+            <version>${project.version}</version>
+        </dependency>
+        
+    </dependencies>
+    <build>
+        <plugins>
+            <plugin>
+                <groupId>org.apache.maven.plugins</groupId>
+                <artifactId>maven-ejb-plugin</artifactId>
+                <configuration>
+                    <ejbVersion>3.0</ejbVersion>
+                </configuration>
+            </plugin>
+        </plugins>
+    </build>
+
+</project>
+

ace-ims-ejb/src/main/java/edu/umiacs/ace/ims/round/PreviousRound.java

+/*
+ * To change this template, choose Tools | Templates
+ * and open the template in the editor.
+ */
+
+package edu.umiacs.ace.ims.round;
+
+import edu.umiacs.ace.ims.tokenclass.TokenClass;
+import edu.umiacs.util.ToStringBuilder;
+import java.io.Serializable;
+import javax.persistence.CascadeType;
+import javax.persistence.Entity;
+import javax.persistence.GeneratedValue;
+import javax.persistence.GenerationType;
+import javax.persistence.Id;
+import javax.persistence.NamedQueries;
+import javax.persistence.NamedQuery;
+import javax.persistence.OneToOne;
+import javax.persistence.Table;
+
+/**
+ *
+ * @author mmcgann
+ */
+@Entity
+@Table(name="previous_round")
+@NamedQueries
+({
+    @NamedQuery(name="PreviousRound.findByTokenClass", 
+                query="select pr from PreviousRound pr where " + 
+                      "pr.tokenClass = :tokenClass")
+})
+public class PreviousRound implements Serializable
+{ 
+    @Id
+    @GeneratedValue(strategy = GenerationType.IDENTITY)
+    private Long id;
+
+    @OneToOne
+    private TokenClass tokenClass;
+    
+    @OneToOne(cascade=CascadeType.PERSIST)
+    private RoundSummary roundSummary;
+    
+    public void setId(Long id)
+    {
+        this.id = id;
+    }
+
+    public Long getId()
+    {
+        return id;
+    }
+
+    @Override
+    public int hashCode()
+    {
+        int hash = 0;
+        hash += (id != null ? id.hashCode() : 0);
+        return hash;
+    }
+
+    @Override
+    public boolean equals(Object object)
+    {
+        // TODO: Warning - this method won't work in the case the id fields are not set
+        if ( !(object instanceof PreviousRound) )
+        {
+            return false;
+        }
+        PreviousRound other = (PreviousRound)object;
+        if ( (this.id == null && other.id != null) || (this.id != null && !this.id.equals(other.id)) )
+        {
+            return false;
+        }
+        return true;
+    }
+
+    @Override
+    public String toString()
+    {
+        return new ToStringBuilder()
+                .append("id", id)
+                .append("tokenClassName", tokenClass.getName())
+                .append("roundSummary",getRoundSummary())
+                .toString();
+    }
+
+    public TokenClass getTokenClass()
+    {
+        return tokenClass;
+    }
+
+    public void setTokenClass(TokenClass tokenClass)
+    {
+        this.tokenClass = tokenClass;
+    }
+
+    public RoundSummary getRoundSummary()
+    {
+        return roundSummary;
+    }
+
+    public void setRoundSummary(RoundSummary roundSummary)
+    {
+        this.roundSummary = roundSummary;
+    }
+
+}

ace-ims-ejb/src/main/java/edu/umiacs/ace/ims/round/PreviousRoundException.java

+/*
+ * To change this template, choose Tools | Templates
+ * and open the template in the editor.
+ */
+
+package edu.umiacs.ace.ims.round;
+
+import edu.umiacs.ace.server.exception.InternalException;
+import javax.ejb.ApplicationException;
+
+/**
+ *
+ * @author mmcgann
+ */
+@ApplicationException(rollback=true)
+public class PreviousRoundException extends InternalException 
+{
+    public PreviousRoundException(int statusCode, String message)
+    {
+        super(statusCode, message);
+    }
+}

ace-ims-ejb/src/main/java/edu/umiacs/ace/ims/round/RoundBean.java

+/*
+ * To change this template, choose Tools | Templates
+ * and open the template in the editor.
+ */
+
+package edu.umiacs.ace.ims.round;
+
+import edu.umiacs.ace.exception.StatusCode;
+import edu.umiacs.ace.ims.tokenclass.TokenClass;
+import edu.umiacs.ace.server.exception.InternalException;
+import edu.umiacs.util.Check;
+import java.util.Date;
+import javax.ejb.Stateless;
+import javax.persistence.EntityExistsException;
+import javax.persistence.EntityManager;
+import javax.persistence.NoResultException;
+import javax.persistence.PersistenceContext;
+import javax.persistence.Query;
+
+/**
+ *
+ * @author mmcgann
+ */
+@Stateless
+public class RoundBean implements RoundLocal 
+{
+    @PersistenceContext
+    private EntityManager em;
+    
+    public PreviousRound seedRoundSummary(RoundSummary roundSummary)
+    {
+        Check.notNull("roundSummary", roundSummary);
+        TokenClass tokenClass = roundSummary.getTokenClass();
+        Check.notNull("roundSummary.tokenClass", tokenClass);
+        
+        roundSummary.setTimestamp(new Date());
+
+        PreviousRound previousRound = new PreviousRound();
+        previousRound.setRoundSummary(roundSummary);
+        previousRound.setTokenClass(tokenClass);
+        
+        try
+        {
+            em.persist(roundSummary);        
+            em.persist(previousRound);
+            em.flush();
+        }
+        catch ( EntityExistsException eee )
+        {
+            throw new PreviousRoundException(StatusCode.ROUND_SEED_EXISTS, 
+                    "Seed round already exists for token class: " + 
+                    tokenClass.getName());
+        }
+        return previousRound;
+    }
+    
+    public PreviousRound findPreviousRound(TokenClass tokenClass)
+    {
+        Check.notNull("tokenClass", tokenClass);
+        
+        try
+        {
+            Query q = em.createNamedQuery("PreviousRound.findByTokenClass");
+            q.setParameter("tokenClass", tokenClass);
+            return (PreviousRound)q.getSingleResult();
+        }
+        catch ( NoResultException nre )
+        {
+            throw new PreviousRoundException(StatusCode.NO_PREVIOUS_ROUND,
+                    "No previous round for: " + tokenClass.getName());
+        }
+    }
+    
+    public RoundSummary createRoundSummary(RoundSummary roundSummary)
+    {
+        Check.notNull("roundSummary", roundSummary);
+        Check.notEmpty("hashValue", roundSummary.getHashValue());
+        
+        roundSummary.setTimestamp(new Date());
+        em.persist(roundSummary);
+        PreviousRound previousRound = findPreviousRound(
+                roundSummary.getTokenClass());
+        previousRound.setRoundSummary(roundSummary);
+        return roundSummary;
+    }
+    
+    public RoundSummary getRoundSummary(long roundId)
+    {
+        RoundSummary rs;
+        rs = em.find(RoundSummary.class, roundId);
+        return rs;
+    }
+}    
+
+

ace-ims-ejb/src/main/java/edu/umiacs/ace/ims/round/RoundLocal.java

+/*
+ * To change this template, choose Tools | Templates
+ * and open the template in the editor.
+ */
+package edu.umiacs.ace.ims.round;
+
+import edu.umiacs.ace.ims.tokenclass.TokenClass;
+import javax.ejb.Local;
+
+/**
+ *
+ * @author mmcgann
+ */
+@Local
+public interface RoundLocal
+{
+    PreviousRound findPreviousRound(TokenClass tokenClass);
+
+    RoundSummary createRoundSummary(RoundSummary roundSummary);
+
+    PreviousRound seedRoundSummary(RoundSummary roundSummary);
+    
+    public RoundSummary getRoundSummary(long roundId);
+}

ace-ims-ejb/src/main/java/edu/umiacs/ace/ims/round/RoundSummary.java

+/*
+ * To change this template, choose Tools | Templates
+ * and open the template in the editor.
+ */
+
+package edu.umiacs.ace.ims.round;
+
+import edu.umiacs.ace.ims.tokenclass.TokenClass;
+import edu.umiacs.ace.util.HashFormatter;
+import edu.umiacs.util.ToStringBuilder;
+import java.io.Serializable;
+import java.util.Date;
+import javax.persistence.Column;
+import javax.persistence.Entity;
+import javax.persistence.GeneratedValue;
+import javax.persistence.GenerationType;
+import javax.persistence.Id;
+import javax.persistence.ManyToOne;
+import javax.persistence.NamedQuery;
+import javax.persistence.Table;
+import javax.persistence.Temporal;
+import javax.persistence.TemporalType;
+import javax.persistence.Transient;
+
+/**
+ *
+ * @author mmcgann
+ */
+@Entity
+@Table(name="round_summary")
+@NamedQuery(name="RoundSummary.selectRoundRange", query="SELECT r from RoundSummary r WHERE r.tokenClass = :tokenClass AND r.id >= :start AND r.id <= :finish")
+public class RoundSummary implements Serializable 
+{
+    @Transient
+    private static final HashFormatter hashFormatter = new HashFormatter();
+
+    @Id
+    @GeneratedValue(strategy = GenerationType.IDENTITY)
+    private Long id;
+    
+    @ManyToOne
+    private TokenClass tokenClass;
+  
+    @Column(name="hash_value", nullable=false)
+    private String hashValue;
+    
+    @Temporal(TemporalType.TIMESTAMP)
+    @Column(name="time_stamp", nullable=false)
+    private Date timestamp;
+
+    public void setId(Long id)
+    {
+        this.id = id;
+    }
+
+    public Long getId()
+    {
+        return id;
+    }
+
+    @Override
+    public int hashCode()
+    {
+        int hash = 0;
+        hash += (id != null ? id.hashCode() : 0);
+        return hash;
+    }
+
+    @Override
+    public boolean equals(Object object)
+    {
+        // TODO: Warning - this method won't work in the case the id fields are not set
+        if ( !(object instanceof RoundSummary) )
+        {
+            return false;
+        }
+        RoundSummary other = (RoundSummary)object;
+        if ( (this.id == null && other.id != null) || (this.id != null && !this.id.equals(other.id)) )
+        {
+            return false;
+        }
+        return true;
+    }
+
+    @Override
+    public String toString()
+    {
+        return new ToStringBuilder()
+                .append("id", id)
+                .append("tokenClassName", tokenClass.getName())
+                .append("timestamp", timestamp)
+                .append("hashValue", hashFormatter.format(hashValue))
+                .toString();
+    }
+    
+    public TokenClass getTokenClass()
+    {
+        return tokenClass;
+    }
+
+    public void setTokenClass(TokenClass tokenClass)
+    {
+        this.tokenClass = tokenClass;
+    }
+
+    public String getHashValue()
+    {
+        return hashValue;
+    }
+
+    public void setHashValue(String hashValue)
+    {
+        this.hashValue = hashValue;
+    }
+
+    public Date getTimestamp()
+    {
+        return timestamp;
+    }
+
+    public void setTimestamp(Date timestamp)
+    {
+        this.timestamp = timestamp;
+    }
+
+}

ace-ims-ejb/src/main/java/edu/umiacs/ace/ims/store/IssuedToken.java

+/*
+ * To change this template, choose Tools | Templates
+ * and open the template in the editor.
+ */
+package edu.umiacs.ace.ims.store;
+
+import java.io.Serializable;
+import javax.persistence.Column;
+import javax.persistence.Entity;
+import javax.persistence.GeneratedValue;
+import javax.persistence.GenerationType;
+import javax.persistence.Id;
+import javax.persistence.Lob;
+import javax.persistence.ManyToOne;
+import javax.persistence.NamedQueries;
+import javax.persistence.NamedQuery;
+import javax.persistence.Table;
+
+/**
+ *
+ * @author mmcgann
+ */
+@Entity
+@Table(name="issued_token")
+@NamedQueries({
+    @NamedQuery(
+    name="IssuedTokens.findByTokenStore",
+            query="select it from IssuedToken it where it.tokenStore = :tokenStore")
+})
+public class IssuedToken implements Serializable
+{
+    @Id
+    @GeneratedValue(strategy=GenerationType.IDENTITY)
+    private Long id;
+    
+    @ManyToOne
+    private TokenStore tokenStore;
+   
+    @Column(name="java_token_response")
+    @Lob
+    private byte[] tokenResponse;
+   
+    public void setId(Long id)
+    {
+        this.id = id;
+    }
+
+    public Long getId()
+